ENSDARG00000091090


Danio rerio

Features
Gene ID: ENSDARG00000091090
  
Biological name :xirp2b
  
Synonyms : xin actin binding repeat containing 2b / xirp2b
  
Possible biological names infered from orthology : A4UGR9 / Q4U4S6 / xin actin binding repeat containing 2 / XIRP2
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 49448752
Gene end: 49531762
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000152949
Ensembl peptide - ENSDARP00000105380
Ensembl peptide - ENSDARP00000123847
Ensembl peptide - ENSDARP00000124952
Ensembl peptide - ENSDARP00000147479
NCBI entrez gene - 100535904     See in Manteia.
RefSeq - XM_021479041
swissprot - F1QP52
swissprot - F8W4Y1
swissprot - F8W5W5
ZFIN ID - ZDB-GENE-030521-26
Ensembl - ENSDARG00000091090
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XIRP2ENSG00000163092Homo sapiens
 Xirp2ENSMUSG00000027022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xirp2a / xin actin binding repeat containing 2a / XIRP2* / Q4U4S6* / A4UGR9* / xin actin binding repeat containing 2*ENSDARG0000007111342
xirp1 / Q5PZ43 / xin actin binding repeat containing 1 / Q702N8*ENSDARG0000003072219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR012510  Actin-binding, Xin repeat
 IPR030072  Xin actin-binding repeat-containing protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr