ENSDARG00000030722


Danio rerio

Features
Gene ID: ENSDARG00000030722
  
Biological name :xirp1
  
Synonyms : Q5PZ43 / xin actin binding repeat containing 1 / xirp1
  
Possible biological names infered from orthology : Q702N8
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 23749614
Gene end: 23768832
  
Corresponding Affymetrix probe sets: Dr.152.1.A1_at (Zebrafish Array)   NM_001012377_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000042412
Ensembl peptide - ENSDARP00000123837
Ensembl peptide - ENSDARP00000152018
NCBI entrez gene - 497637     See in Manteia.
RefSeq - NM_001012377
RefSeq - XM_009298510
RefSeq Peptide - NP_001012377
swissprot - Q5PZ43
swissprot - F8W4Z1
ZFIN ID - ZDB-GENE-050221-2
Ensembl - ENSDARG00000030722
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XIRP1ENSGALG00000006025Gallus gallus
 XIRP1ENSG00000168334Homo sapiens
 Xirp1ENSMUSG00000079243Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xirp2a / xin actin binding repeat containing 2a / XIRP2* / Q4U4S6* / A4UGR9* / xin actin binding repeat containing 2*ENSDARG0000007111327
xirp2b / xin actin binding repeat containing 2b / XIRP2* / Q4U4S6* / A4UGR9* / xin actin binding repeat containing 2*ENSDARG0000009109027


Protein motifs (from Interpro)
Interpro ID Name
 IPR012510  Actin-binding, Xin repeat
 IPR030072  Xin actin-binding repeat-containing protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr