ENSDARG00000074337


Danio rerio

Features
Gene ID: ENSDARG00000074337
  
Biological name :cbfa2t2
  
Synonyms : cbfa2t2 / core-binding factor, runt domain, alpha subunit 2; translocated to, 2
  
Possible biological names infered from orthology : CBFA2/RUNX1 translocation partner 2 / core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) / O43439 / O70374
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 57634360
Gene end: 57722816
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135617
Ensembl peptide - ENSDARP00000156695
Ensembl peptide - ENSDARP00000078242
Ensembl peptide - ENSDARP00000128623
NCBI entrez gene - 767652     See in Manteia.
swissprot - A0A0R4III0
swissprot - F1Q7R0
swissprot - Q08C32
swissprot - X1WEH2
ZFIN ID - ZDB-GENE-070209-1
Ensembl - ENSDARG00000074337
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CBFA2T2ENSGALG00000003096Gallus gallus
 O43439ENSG00000078699Homo sapiens
 O70374ENSMUSG00000038533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
runx1t1 / runt-related transcription factor 1; translocated to, 1 (cyclin D-related) / Q06455* / Q61909* / RUNX1 translocation partner 1*ENSDARG0000000368062
cbfa2t3 / core-binding factor, runt domain, alpha subunit 2; translocated to, 3 / O75081* / CBFA2/RUNX1 translocation partner 3*ENSDARG0000007901260
deaf1 / DEAF1 transcription factor / O75398* / Q9Z1T5* / Deformed epidermal autoregulatory factor 1 homolog *ENSDARG0000008884413


Protein motifs (from Interpro)
Interpro ID Name
 IPR002893  Zinc finger, MYND-type
 IPR003894  TAFH/NHR1
 IPR013289  CBFA2T family
 IPR014896  NHR2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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