ENSDARG00000074414


Danio rerio

Features
Gene ID: ENSDARG00000074414
  
Biological name :sema4ba
  
Synonyms : sema4ba / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba
  
Possible biological names infered from orthology : Q62179 / SEMA4B / semaphorin 4B
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 25783446
Gene end: 25905623
  
Corresponding Affymetrix probe sets: Dr.15351.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000042073
Ensembl peptide - ENSDARP00000132779
Ensembl peptide - ENSDARP00000116301
NCBI entrez gene - 572261     See in Manteia.
RefSeq - NM_001128352
RefSeq Peptide - NP_001121824
swissprot - E7F898
swissprot - A0A0R4IDW5
swissprot - M9MMB3
ZFIN ID - ZDB-GENE-070705-31
Ensembl - ENSDARG00000074414
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA4BENSGALG00000008297Gallus gallus
 SEMA4BENSG00000185033Homo sapiens
 Q62179ENSMUSG00000030539Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sema4bb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Bb / Q62179* / SEMA4B* / semaphorin 4B*ENSDARG0000007610460
sema4c / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C / Q64151* / Q9C0C4* / semaphorin 4C*ENSDARG0000007961134
sema4ga / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000007659533
sema4ab / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab / SEMA4A* / Q62178* / Q9H3S1* / semaphorin 4A*ENSDARG0000006235232
SEMA4D / semaphorin 4D / Q92854*ENSDARG0000006780132
si:ch211-129c21.1ENSDARG0000002477529
sema4e / semaphorin 4eENSDARG0000005299729
sema4gb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Gb / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000008814328
sema3b / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B / Q13214* / semaphorin 3B*ENSDARG0000001167227
SEMA4F / ssemaphorin 4F / O95754*ENSDARG0000010030827
sema3bl / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl / Q9NS98* / Q4LFA9* / SEMA3G* / semaphorin 3G*ENSDARG0000000756026
sema3aa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000001923526
si:dkey-49n23.1ENSDARG0000004092026
sema3ab / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000004221026
sema3fa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa / SEMA3F* / O88632* / Q13275* / semaphorin 3F*ENSDARG0000001116325
sema3d / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D / O95025* / Q8BH34* / semaphorin 3D*ENSDARG0000001736925
sema3e / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E / O15041* / P70275* / semaphorin 3E*ENSDARG0000003657125
sema3h / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3HENSDARG0000004261625
sema3fb / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb / SEMA3F* / O88632* / Q13275* / semaphorin 3F*ENSDARG0000005537325
sema3gb / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3GbENSDARG0000001360724


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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