ENSDARG00000075030


Danio rerio

Features
Gene ID: ENSDARG00000075030
  
Biological name :stx10
  
Synonyms : stx10 / syntaxin 10
  
Possible biological names infered from orthology : O60499
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 31190155
Gene end: 31202851
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098502
NCBI entrez gene - 100151249     See in Manteia.
NCBI entrez gene - 110440104     See in Manteia.
swissprot - E7EXN4
ZFIN ID - ZDB-GENE-041111-53
Ensembl - ENSDARG00000075030
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX10ENSG00000104915Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx10 / syntaxin 10 / O60499*ENSDARG00000114081100
stx6 / syntaxin 6 / O43752*ENSDARG0000004274261


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR010989  SNARE
 IPR015260  Syntaxin 6, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000020405 napab / N-ethylmaleimide-sensitive factor attachment protein, alpha b / NAPA* / Q9DB05* / P54920* / NSF attachment protein alpha* / Alpha-soluble NSF attachment protein *  / complex / reaction
 ENSDARG00000038991 nsfb / N-ethylmaleimide-sensitive factor b / NSF* / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSDARG00000007654 nsfa / N-ethylmaleimide-sensitive factor a / NSF* / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSDARG00000018432 m6pr / mannose-6-phosphate receptor (cation dependent) / P20645* / P24668* / Cation-dependent mannose-6-phosphate receptor *  / reaction
 ENSDARG00000045027 rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*  / reaction
 ENSDARG00000006094 igf2r / insulin-like growth factor 2 receptor / P11717* / Q07113* / Cation-independent mannose-6-phosphate receptor *  / reaction
 ENSDARG00000069324 vps53 / vacuolar protein sorting 53 homolog (S. cerevisiae) / Q5VIR6* / Q8CCB4* / VPS53, GARP complex subunit*  / reaction
 ENSDARG00000045065 vti1a / vesicle transport through interaction with t-SNAREs 1A / O89116* / Q96AJ9*  / complex
 ENSDARG00000070161 vamp3 / vesicle-associated membrane protein 3 (cellubrevin) / P63024* / Q15836* / vesicle associated membrane protein 3*  / complex / reaction
 ENSDARG00000003307 stx16 / syntaxin 16 / Q8BVI5* / O14662* / STX16-NPEPL1* / STX16-NPEPL1 readthrough (NMD candidate)*  / complex
 ENSDARG00000099258 vps52 / vacuolar protein sorting 52 homolog (S. cerevisiae) / Q8C754* / Q8N1B4* / VPS52, GARP complex subunit*  / reaction
 ENSDARG00000112165 Q6GQN7 / rabepk / Rab9 effector protein with kelch motifs / Q7Z6M1*  / reaction






 

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