ENSDARG00000078068


Danio rerio

Features
Gene ID: ENSDARG00000078068
  
Biological name :abcg4b
  
Synonyms : abcg4b / ATP-binding cassette, sub-family G (WHITE), member 4b
  
Possible biological names infered from orthology : ABCG4 / ATP binding cassette subfamily G member 4 / Q9H172
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 23487730
Gene end: 23508214
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102351
NCBI entrez gene - 794238     See in Manteia.
RefSeq - NM_001111212
RefSeq Peptide - NP_001104682
swissprot - F1QIU0
ZFIN ID - ZDB-GENE-080215-10
Ensembl - ENSDARG00000078068
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCG4ENSGALG00000006795Gallus gallus
 ABCG4ENSG00000172350Homo sapiens
 Abcg4ENSMUSG00000032131Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcg4a / ATP-binding cassette, sub-family G (WHITE), member 4a / ABCG4* / Q9H172* / ATP binding cassette subfamily G member 4*ENSDARG0000006104786
abcg1 / ATP-binding cassette, sub-family G (WHITE), member 1 / P45844* / Q64343* / ATP binding cassette subfamily G member 1*ENSDARG0000006347571
abcg2c / ATP-binding cassette, sub-family G (WHITE), member 2cENSDARG0000005857425
abcg2b / ATP-binding cassette, sub-family G (WHITE), member 2bENSDARG0000007936125
abcg2a / ATP-binding cassette, sub-family G (WHITE), member 2a / Abcg3* / ABCG2* / Q9UNQ0* / Q99P81* / ATP binding cassette subfamily G member 3* / ATP binding cassette subfamily G member 2...ENSDARG0000010007525
abcg2d / ATP-binding cassette, sub-family G (WHITE), member 2d / Abcg3* / ABCG2* / Q9UNQ0* / Q99P81* / ATP binding cassette subfamily G member 3* / ATP binding cassette subfamily G member 2...ENSDARG0000001681823
abcg5 / ATP-binding cassette, sub-family G (WHITE), member 5 / Q99PE8* / Q9H222* / ATP binding cassette subfamily G member 5*ENSDARG0000006307823


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR013525  ABC-2 type transporter
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033344 cholesterol efflux IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0017127 cholesterol transporter activity IBA
 molecular_functionGO:0034041 sterol-transporting ATPase activity IBA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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