ENSDARG00000078574


Danio rerio

Features
Gene ID: ENSDARG00000078574
  
Biological name :si:dkey-21c19.3
  
Synonyms : si:dkey-21c19.3
  
Possible biological names infered from orthology : P59110 / Q9P0U3 / SENP1 / Sentrin-specific protease 1 / SUMO1/sentrin specific peptidase 1
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 25770401
Gene end: 25779995
  
Corresponding Affymetrix probe sets: Dr.23964.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103287
NCBI entrez gene - 100007636     See in Manteia.
swissprot - E7F9B8
ZFIN ID - ZDB-GENE-030131-6462
Ensembl - ENSDARG00000078574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SENP1ENSG00000079387Homo sapiens
 Senp1ENSMUSG00000033075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
senp2 / SUMO1/sentrin/SMT3 specific peptidase 2 / Gm7275* / Gm5407* / Gm5415* / Q91ZX6* / Q9HC62* / AF366264* / 4930444G20Rik* / cDNA sequence AF366264* / RIKEN cDNA 4930444G20 gene* / Mus ...ENSDARG0000007383723
senp3b / SUMO1/sentrin/SMT3 specific peptidase 3b / SENP3* / Q9EP97* / Q9H4L4* / SENP3-EIF4A1* / Sentrin-specific protease 3 * / SUMO1/sentrin/SMT3 specific peptidase 3* / SENP3-EIF4A1 read...ENSDARG0000005674113
senp5 / SUMO1/sentrin specific peptidase 5 / Q6NXL6* / Q96HI0* / Sentrin-specific protease 5 *ENSDARG0000006064613
senp3a / SUMO1/sentrin/SMT3 specific peptidase 3a / SENP3* / Q9EP97* / Q9H4L4* / SENP3-EIF4A1* / Sentrin-specific protease 3 * / SUMO1/sentrin/SMT3 specific peptidase 3* / SENP3-EIF4A1 read...ENSDARG0000009553812


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016926 protein desumoylation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA


Pathways (from Reactome)
Pathway description
SUMO is proteolytically processed


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000028119 Q6NV25 / sumo3a / small ubiquitin-like modifier 3a / SUMO3* / Q9Z172* / P55854* / small ubiquitin-like modifier 3*  / reaction
 ENSDARG00000035993 sumo3b / small ubiquitin-like modifier 3b / SUMO3* / P55854* / small ubiquitin-like modifier 3*  / reaction
 ENSDARG00000044267 sumo1 / Q7SZR5 / small ubiquitin-like modifier 1 / P63166* / P63165* / Small ubiquitin-related modifier 1 *  / reaction
 ENSDARG00000102741 sumo2b / Q6DHL4 / small ubiquitin-like modifier 2b / SUMO4* / SUMO2* / Q6EEV6* / P61956* / P61957* / small ubiquitin-like modifier 4* / small ubiquitin-like modifier 2*  / reaction






 

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