ENSDARG00000078959


Danio rerio

Features
Gene ID: ENSDARG00000078959
  
Biological name :gb:eh507706
  
Synonyms : expressed sequence EH507706 / gb:eh507706
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 30647545
Gene end: 30661754
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098968
NCBI entrez gene - 557460     See in Manteia.
RefSeq - NM_001177445
RefSeq Peptide - NP_001170916
swissprot - C4IXV6
ZFIN ID - ZDB-GENE-141215-16
Ensembl - ENSDARG00000078959
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TPCN3ENSGALG00000008198Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tpcn1 / two pore segment channel 1 / Q9EQJ0* / Q9ULQ1* / Two pore calcium channel protein 1 *ENSDARG0000006236224
tpcn2 / two pore segment channel 2 / Q8NHX9*ENSDARG0000010042021


Protein motifs (from Interpro)
Interpro ID Name
 IPR005821  Ion transport domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IBA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0086010 membrane depolarization during action potential IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0072345 NAADP-sensitive calcium-release channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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