ENSDARG00000062362


Danio rerio

Features
Gene ID: ENSDARG00000062362
  
Biological name :tpcn1
  
Synonyms : tpcn1 / two pore segment channel 1
  
Possible biological names infered from orthology : Q9EQJ0 / Q9ULQ1 / Two pore calcium channel protein 1
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 23201370
Gene end: 23231224
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118062
Ensembl peptide - ENSDARP00000084535
Ensembl peptide - ENSDARP00000147290
NCBI entrez gene - 567534     See in Manteia.
swissprot - A2BHL7
swissprot - F1R4Z3
ZFIN ID - ZDB-GENE-060526-199
Ensembl - ENSDARG00000062362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TPCN1ENSGALG00000008357Gallus gallus
 TPCN1ENSG00000186815Homo sapiens
 Tpcn1ENSMUSG00000032741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gb:eh507706 / expressed sequence EH507706ENSDARG0000007895923
tpcn2 / two pore segment channel 2 / Q8NHX9*ENSDARG0000010042020


Protein motifs (from Interpro)
Interpro ID Name
 IPR005821  Ion transport domain
 IPR028801  Two pore calcium channel protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IBA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0086010 membrane depolarization during action potential IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0072345 NAADP-sensitive calcium-release channel activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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