ENSDARG00000079111


Danio rerio

Features
Gene ID: ENSDARG00000079111
  
Biological name :actc1c
  
Synonyms : actc1c / actin, alpha, cardiac muscle 1c
  
Possible biological names infered from orthology : ACTG2 / actin, gamma 2, smooth muscle, enteric / Actin, gamma-enteric smooth muscle / P63267 / P63268
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 14087045
Gene end: 14125498
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128683
Ensembl peptide - ENSDARP00000100195
NCBI entrez gene - 415164     See in Manteia.
RefSeq - XM_009297927
RefSeq - XM_021473834
swissprot - X1WEN2
swissprot - F1RCB6
ZFIN ID - ZDB-GENE-040625-46
Ensembl - ENSDARG00000079111
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000040415Gallus gallus
 ACTG2ENSG00000163017Homo sapiens
 Actg2ENSMUSG00000059430Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acta2 / actc1b / actin, alpha, cardiac muscle 1b / ACTC1* / P68032* / actin, alpha, cardiac muscle 1*ENSDARG0000009919798
acta1a / actin, alpha 1a, skeletal muscleENSDARG0000003637197
actc1a / actin, alpha, cardiac muscle 1a / ACTC1* / P68032* / P68033* / actin, alpha, cardiac muscle 1*ENSDARG0000004253597
acta2 / actin, alpha 2, smooth muscle, aorta / P62736* / P62737* / Actin, aortic smooth muscle Actin, aortic smooth muscle, intermediate form*ENSDARG0000004518097
acta1b / actin, alpha 1b, skeletal muscleENSDARG0000005561897
ACTC1 / zgc:86709 / P68032* / P68033* / actin, alpha, cardiac muscle 1*ENSDARG0000005791197
actc1a / actin, alpha, cardiac muscle 1a / ACTC1* / P68032* / P68033* / actin, alpha, cardiac muscle 1*ENSDARG0000007612697
actb1 / Q7ZVI7 / actin, beta 1 / ACTB* / ACTG1* / POTEJ* / P60709* / P0CG39* / P60710* / P63260* / P63261* / actin beta* / actin gamma 1* / POTE ankyrin domain family member J* / Actin, cyt...ENSDARG0000003774692
actb2 / Q7ZVF9 / actin, beta 2 / ACTB* / ACTG1* / POTEJ* / P60709* / P0CG39* / P60710* / P63260* / P63261* / actin beta* / actin gamma 1* / POTE ankyrin domain family member J* / Actin, cyt...ENSDARG0000003787092
actr1 / ARP1 actin related protein 1, centractin / Q8R5C5* / ACTR1B* / P42025* / Beta-centractin * / ARP1 actin related protein 1 homolog B*ENSDARG0000001161154
si:ch211-241j12.3ENSDARG0000004396352


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR004001  Actin, conserved site
 IPR020902  Actin/actin-like conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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