ENSDARG00000088377


Danio rerio

Features
Gene ID: ENSDARG00000088377
  
Biological name :rp1l1b
  
Synonyms : retinitis pigmentosa 1-like 1b / rp1l1b
  
Possible biological names infered from orthology : Q8CGM2 / retinitis pigmentosa 1 homolog like 1 / RP1L1 / RP1 like 1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 19119800
Gene end: 19148677
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126512
NCBI entrez gene - 101885561     See in Manteia.
swissprot - E7F542
ZFIN ID - ZDB-GENE-091204-67
Ensembl - ENSDARG00000088377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000028138Gallus gallus
 RP1L1ENSG00000183638Homo sapiens
 Rp1l1ENSMUSG00000046049Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rp1l1a / retinitis pigmentosa 1-like 1a / RP1L1* / Q8CGM2* / RP1 like 1* / retinitis pigmentosa 1 homolog like 1*ENSDARG0000008945818
dcdc2b / doublecortin domain containing 2B / A2VCK2*ENSDARG000000537442
DCDC2C / si:dkey-25g12.4 / A8MYV0* / Q9D1B8* / doublecortin domain containing 2C* / Doublecortin domain-containing protein 2C *ENSDARG000001032642
rp1 / retinitis pigmentosa 1 (autosomal dominant) / P56716* / P56715* / Oxygen-regulated protein 1 * / RP1, axonemal microtubule associated*ENSDARG000000776871


Protein motifs (from Interpro)
Interpro ID Name
 IPR003533  Doublecortin domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035082 axoneme assembly IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0042461 photoreceptor cell development IBA
 biological_processGO:0060041 retina development in camera-type eye IBA
 cellular_componentGO:0005930 axoneme IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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