ENSDARG00000077687


Danio rerio

Features
Gene ID: ENSDARG00000077687
  
Biological name :rp1
  
Synonyms : retinitis pigmentosa 1 (autosomal dominant) / rp1
  
Possible biological names infered from orthology : Oxygen-regulated protein 1 / P56715 / P56716 / RP1, axonemal microtubule associated
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 30732886
Gene end: 30734098
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114695
swissprot - F1QI02
ZFIN ID - ZDB-GENE-070912-612
Ensembl - ENSDARG00000077687
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RP1ENSG00000104237Homo sapiens
 Rp1ENSMUSG00000025900Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rp1l1a / retinitis pigmentosa 1-like 1a / RP1L1* / Q8CGM2* / RP1 like 1* / retinitis pigmentosa 1 homolog like 1*ENSDARG0000008945839
dcdc2b / doublecortin domain containing 2B / A2VCK2*ENSDARG0000005374424
rp1l1b / retinitis pigmentosa 1-like 1b / RP1L1* / Q8CGM2* / RP1 like 1* / retinitis pigmentosa 1 homolog like 1*ENSDARG0000008837722
DCDC2C / si:dkey-25g12.4 / A8MYV0* / Q9D1B8* / doublecortin domain containing 2C* / Doublecortin domain-containing protein 2C *ENSDARG0000010326420


Protein motifs (from Interpro)
Interpro ID Name
 IPR003533  Doublecortin domain
 IPR033013  Oxygen-regulated protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0042461 photoreceptor cell development IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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