ENSDARG00000094832


Danio rerio

Features
Gene ID: ENSDARG00000094832
  
Biological name :F13A1 (1 of many)
  
Synonyms : coagulation factor XIII A chain / F13A1 (1 of many)
  
Possible biological names infered from orthology : F13A1 / P00488 / Q8BH61
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 2470061
Gene end: 2480898
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122425
Ensembl peptide - ENSDARP00000145315
swissprot - F1QSE3
Ensembl - ENSDARG00000094832
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F13A1ENSGALG00000012802Gallus gallus
 F13A1ENSG00000124491Homo sapiens
 F13a1ENSMUSG00000039109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
f13a1a.1 / coagulation factor XIII, A1 polypeptide a, tandem duplicate 1 / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000004545365
f13a1b / coagulation factor XIII, A1 polypeptide b / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000003689349
tgm1l1 / transglutaminase 1 like 1 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010210641
tgm1l4 / transglutaminase 1 like 4 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010140739
tgm1 / transglutaminase 1, K polypeptide / P22735* / transglutaminase 1*ENSDARG0000001779937
tgm2b / transglutaminase 2b / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007409437
tgm1l2 / transglutaminase 1 like 2 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010159537
tgm1l3 / transglutaminase 1 like 3 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000000591334
tgm2a / transglutaminase 2, C polypeptide A / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007015734
tgm2l / transglutaminase 2, likeENSDARG0000009338133
tgm5l / transglutaminase 5, like / TGM5* / TGM6* / TGM7* / TGM3* / EPB42* / Q96PF1* / O43548* / O95932* / P16452* / P49222* / Q08188* / Q08189* / Q9D7I9* / transglutaminase 7* / transglutam...ENSDARG0000009883731
tgm8 / transglutaminase 8 / TGM7* / TGM6* / TGM3* / TGM5* / EPB42* / Q08189* / Q96PF1* / O43548* / Q9D7I9* / O95932* / P16452* / P49222* / Q08188* / transglutaminase 6* / transglutaminase 7...ENSDARG0000009765111


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR034810  Coagulation factor XIII A chain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 biological_processGO:0072378 blood coagulation, fibrin clot formation IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Common Pathway of Fibrin Clot Formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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