ENSDARG00000045453


Danio rerio

Features
Gene ID: ENSDARG00000045453
  
Biological name :f13a1a.1
  
Synonyms : coagulation factor XIII, A1 polypeptide a, tandem duplicate 1 / f13a1a.1
  
Possible biological names infered from orthology : coagulation factor XIII A chain / F13A1 / P00488 / Q8BH61
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 2495197
Gene end: 2515623
  
Corresponding Affymetrix probe sets: Dr.18392.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120334
NCBI entrez gene - 767742     See in Manteia.
RefSeq - XM_009297220
swissprot - F1QC84
ZFIN ID - ZDB-GENE-060929-1250
Ensembl - ENSDARG00000045453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F13A1ENSGALG00000012802Gallus gallus
 F13A1ENSG00000124491Homo sapiens
 F13a1ENSMUSG00000039109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
f13a1b / coagulation factor XIII, A1 polypeptide b / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000003689346
F13A1 (1 of many) / coagulation factor XIII A chain / F13A1* / P00488*ENSDARG0000009483245
tgm1l4 / transglutaminase 1 like 4 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010140735
tgm1l1 / transglutaminase 1 like 1 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010210635
tgm1 / transglutaminase 1, K polypeptide / P22735* / transglutaminase 1*ENSDARG0000001779934
tgm1l3 / transglutaminase 1 like 3 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000000591333
tgm1l2 / transglutaminase 1 like 2 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010159533
tgm2a / transglutaminase 2, C polypeptide A / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007015731
tgm2b / transglutaminase 2b / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007409430
tgm2l / transglutaminase 2, likeENSDARG0000009338129
tgm5l / transglutaminase 5, like / TGM5* / TGM6* / TGM7* / TGM3* / EPB42* / Q96PF1* / O43548* / O95932* / P16452* / P49222* / Q08188* / Q08189* / Q9D7I9* / transglutaminase 7* / transglutam...ENSDARG0000009883728
tgm8 / transglutaminase 8 / TGM7* / TGM6* / TGM3* / TGM5* / EPB42* / Q08189* / Q96PF1* / O43548* / Q9D7I9* / O95932* / P16452* / P49222* / Q08188* / transglutaminase 6* / transglutaminase 7...ENSDARG0000009765113


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal
 IPR034810  Coagulation factor XIII A chain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 biological_processGO:0072378 blood coagulation, fibrin clot formation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Common Pathway of Fibrin Clot Formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000045453 f13a1a.1 / coagulation factor XIII, A1 polypeptide a, tandem duplicate 1 / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*  / complex






 

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