ENSDARG00000102106


Danio rerio

Features
Gene ID: ENSDARG00000102106
  
Biological name :tgm1l1
  
Synonyms : tgm1l1 / transglutaminase 1 like 1
  
Possible biological names infered from orthology : P22735 / TGM1 / transglutaminase 1
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 51665527
Gene end: 51719439
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135992
Ensembl peptide - ENSDARP00000152957
NCBI entrez gene - 566581     See in Manteia.
swissprot - A0A0R4IN46
ZFIN ID - ZDB-GENE-060503-139
Ensembl - ENSDARG00000102106
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TGM1ENSG00000092295Homo sapiens
 Tgm1ENSMUSG00000022218Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tgm1 / transglutaminase 1, K polypeptide / P22735* / transglutaminase 1*ENSDARG0000001779957
tgm1l4 / transglutaminase 1 like 4 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010140751
tgm1l2 / transglutaminase 1 like 2 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010159547
tgm1l3 / transglutaminase 1 like 3 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000000591345
f13a1b / coagulation factor XIII, A1 polypeptide b / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000003689336
f13a1a.1 / coagulation factor XIII, A1 polypeptide a, tandem duplicate 1 / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000004545331
tgm2b / transglutaminase 2b / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007409431
tgm2a / transglutaminase 2, C polypeptide A / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007015729
tgm2l / transglutaminase 2, likeENSDARG0000009338129
tgm5l / transglutaminase 5, like / TGM5* / TGM6* / TGM7* / TGM3* / EPB42* / Q96PF1* / O43548* / O95932* / P16452* / P49222* / Q08188* / Q08189* / Q9D7I9* / transglutaminase 7* / transglutam...ENSDARG0000009883726
F13A1 (1 of many) / coagulation factor XIII A chain / F13A1* / P00488*ENSDARG0000009483225
tgm8 / transglutaminase 8 / TGM7* / TGM6* / TGM3* / TGM5* / EPB42* / Q08189* / Q96PF1* / O43548* / Q9D7I9* / O95932* / P16452* / P49222* / Q08188* / transglutaminase 6* / transglutaminase 7...ENSDARG0000009765115


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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