ENSDARG00000095536


Danio rerio

Features
Gene ID: ENSDARG00000095536
  
Biological name :TRIM62 (1 of many)
  
Synonyms : si:ch211-193i15.2 / TRIM62 (1 of many)
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase TRIM62 / Q80V85 / Q9BVG3 / TRIM62 / tripartite motif containing 62
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 40227753
Gene end: 40257225
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113468
swissprot - F1R9N2
ZFIN ID - ZDB-GENE-141216-17
Ensembl - ENSDARG00000095536
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM62ENSGALG00000028437Gallus gallus
 Q9BVG3ENSG00000116525Homo sapiens
 Q80V85ENSMUSG00000041000Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim62 / tripartite motif containing 62 / Q80V85* / Q9BVG3* / E3 ubiquitin-protein ligase TRIM62 *ENSDARG0000006090199
trim105 / tripartite motif containing 105ENSDARG0000009988530
trim69 / tripartite motif containing 69 / Q86WT6*ENSDARG0000006068828
trim35-13 / tripartite motif containing 35-13 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000000397026
trim35-28 / tripartite motif containing 35-28 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000002102126
trim47 / tripartite motif containing 47ENSDARG0000005667826
trim35-12 / tripartite motif containing 35-12 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010126426
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005895825
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010221925
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009963924
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009968424
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010105524
CR394535.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010319324
si:ch73-54f23.4ENSDARG0000010546024
trim35-30 / tripartite motif containing 35-30 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000011409924
trim35-10 / tripartite motif containing 35-10 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003307123
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000004023023
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005225523
trim35-20 / tripartite motif containing 35-20 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007084723
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007124123


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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