ENSDARG00000097055


Danio rerio

Features
Gene ID: ENSDARG00000097055
  
Biological name :si:ch211-284f22.3
  
Synonyms : si:ch211-284f22.3
  
Possible biological names infered from orthology : Q810I0 / Q86XT2 / vacuolar protein sorting 37D / VPS37D / VPS37D, ESCRT-I subunit
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 59116068
Gene end: 59202264
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128756
NCBI entrez gene - 101884856     See in Manteia.
swissprot - X1WEV5
ZFIN ID - ZDB-GENE-060526-166
Ensembl - ENSDARG00000097055
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q86XT2ENSG00000176428Homo sapiens
 Q810I0ENSMUSG00000043614Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vps37b / vacuolar protein sorting 37 homolog B (S. cerevisiae) / Q8R0J7* / Q9H9H4* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*ENSDARG0000003931924
vps37c / vacuolar protein sorting 37 homolog C (S. cerevisiae) / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*ENSDARG0000003183622
zgc:114173 / Q8R0J7* / Q9H9H4* / VPS37B* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*ENSDARG0000010114322
vps37a / vacuolar protein sorting 37A / Q8CHS8* / Q8NEZ2* / VPS37A, ESCRT-I subunit*ENSDARG0000001711914


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 cellular_componentGO:0000813 ESCRT I complex IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000011897 tsg101b / tumor susceptibility 101b / Q99816* / TSG101* / Q61187* / tumor susceptibility 101* / tumor susceptibility gene 101*  / complex
 ENSDARG00000005318 stam2 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 / O75886* / O88811* / signal transducing adaptor molecule 2*  / reaction
 ENSDARG00000058076 snf8 / Q5U3V9 / SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) / Q9CZ28* / Q96H20* / SNF8, ESCRT-II complex subunit* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cere...  / reaction
 ENSDARG00000058746 ubap1 / ubiquitin associated protein 1 / Q8BH48* / Q9NZ09*  / complex
 ENSDARG00000020960 hgs / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSDARG00000002127 stam / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 / P70297* / Q92783* / signal transducing adaptor molecule*  / reaction
 ENSDARG00000103203 vps28 / vacuolar protein sorting 28 (yeast) / Q9D1C8* / Q9UK41* / VPS28, ESCRT-I subunit* / vacuolar protein sorting 28*  / complex
 ENSDARG00000059079 vps25 / vacuolar protein sorting 25 homolog (S. cerevisiae) / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25* / vacuolar protein sorting 25 homolog*  / reaction






 

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