ENSDARG00000098792


Danio rerio

Features
Gene ID: ENSDARG00000098792
  
Biological name :znrf2b
  
Synonyms : Q08CN9 / zinc and ring finger 2b / znrf2b
  
Possible biological names infered from orthology : Q71FD5 / Q8NHG8 / zinc and ring finger 2 / ZNRF2
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 53733714
Gene end: 53800047
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134291
NCBI entrez gene - 767761     See in Manteia.
RefSeq - NM_001076728
RefSeq Peptide - NP_001070196
swissprot - A0A0G2KPI1
swissprot - Q08CN9
ZFIN ID - ZDB-GENE-060929-24
Ensembl - ENSDARG00000098792
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNRF2ENSGALG00000031163Gallus gallus
 ZNRF2ENSG00000180233Homo sapiens
 Znrf2ENSMUSG00000058446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znrf2a / zinc and ring finger 2aENSDARG0000007785544
znrf1 / Q6P4U6 / zinc and ring finger 1 / Q8ND25* / Q91V17*ENSDARG0000002047540
zgc:66427ENSDARG0000002330334


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0042734 presynaptic membrane IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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