ENSDARG00000098903


Danio rerio

Features
Gene ID: ENSDARG00000098903
  
Biological name :tfe3a
  
Synonyms : tfe3a / transcription factor binding to IGHM enhancer 3a
  
Possible biological names infered from orthology : P19532 / Q64092 / TFE3 / transcription factor binding to IGHM enhancer 3 / Transcription factor E3
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 7778770
Gene end: 7809451
  
Corresponding Affymetrix probe sets: Dr.12632.1.S1_at (Zebrafish Array)   Dr.22616.1.A1_at (Zebrafish Array)   NM_131848_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135726
Ensembl peptide - ENSDARP00000139251
NCBI entrez gene - 114834     See in Manteia.
RefSeq - NM_131848
RefSeq Peptide - NP_571923
swissprot - M9MM95
swissprot - A0A0R4IU64
ZFIN ID - ZDB-GENE-010919-2
Ensembl - ENSDARG00000098903
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TFE3ENSG00000068323Homo sapiens
 Tfe3ENSMUSG00000000134Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tfe3b / transcription factor binding to IGHM enhancer 3b / TFE3* / Q64092* / P19532* / Transcription factor E3 * / transcription factor binding to IGHM enhancer 3*ENSDARG0000001945755
mitfb / microphthalmia-associated transcription factor b / MITF* / O75030* / melanogenesis associated transcription factor*ENSDARG0000003783345
tfeb / transcription factor EB / P19484* / Q9R210*ENSDARG0000001079439
mitfa / microphthalmia-associated transcription factor a / MITF* / O75030* / Q08874* / melanogenesis associated transcription factor*ENSDARG0000000373236
tfec / transcription factor EC / O14948*ENSDARG0000009874532


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR021802  MiT/TFE transcription factors, C-terminal
 IPR024100  Transcription factor E3
 IPR031867  MiT/TFE transcription factors, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006959 humoral immune response IEA
 biological_processGO:0045670 regulation of osteoclast differentiation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005654 nucleoplasm IC
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IDA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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