ENSDARG00000098967


Danio rerio

Features
Gene ID: ENSDARG00000098967
  
Biological name :rabgap1
  
Synonyms : rabgap1 / RAB GTPase activating protein 1
  
Possible biological names infered from orthology : A2AWA9 / Q9Y3P9
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 9697097
Gene end: 9810597
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133354
swissprot - A0A0G2KLX0
ZFIN ID - ZDB-GENE-170622-1
Ensembl - ENSDARG00000098967
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RABGAP1ENSGALG00000001225Gallus gallus
 Q9Y3P9ENSG00000011454Homo sapiens
 A2AWA9ENSMUSG00000035437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276619
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083919
tbc1d4 / TBC1 domain family, member 4 / O60343*ENSDARG0000007515619
rabgap1l / RAB GTPase activating protein 1-likeENSDARG0000006175718
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG0000006208118
rabgap1l2 / RAB GTPase activating protein 1-like 2 / A6H6A9* / B7ZAP0* / Q5R372* / RABGAP1L* / RAB GTPase activating protein 1 like*ENSDARG0000006031514
evi5a / ecotropic viral integration site 5aENSDARG0000007766614
tbc1d14 / TBC1 domain family, member 14 / Q9P2M4*ENSDARG0000000352011
tbc1d12b / TBC1 domain family, member 12b / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG0000007377110
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000001120884


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR022164  Kinesin-like
 IPR033185  Rab GTPase-activating protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000103714 rab6a / RAB6A, member RAS oncogene family / RAB6C* / RAB6D* / P20340* / Q9H0N0* / P35279* / RAB6C, member RAS oncogene family* / RAB6D, member RAS oncogene family*  / complex / reaction






 

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