ENSGALG00000001225


Gallus gallus

Features
Gene ID: ENSGALG00000001225
  
Biological name :RABGAP1
  
Synonyms : RABGAP1 / RAB GTPase activating protein 1
  
Possible biological names infered from orthology : A2AWA9 / Q9Y3P9
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 9303956
Gene end: 9363121
  
Corresponding Affymetrix probe sets: Gga.19228.1.S1_at (Chicken Array)   Gga.19228.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045574
Ensembl peptide - ENSGALP00000001856
NCBI entrez gene - 417106     See in Manteia.
RefSeq - XM_415391
RefSeq - XM_004946008
RefSeq - XM_015279575
swissprot - F1P0U3
swissprot - A0A1D5NYW3
Ensembl - ENSGALG00000001225
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rabgap1ENSDARG00000098967Danio rerio
 Q9Y3P9ENSG00000011454Homo sapiens
 A2AWA9ENSMUSG00000035437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RABGAP1L / rab GTPase-activating protein 1-like / A6H6A9* / B7ZAP0* / Q5R372*ENSGALG0000000457862
TBC1D1 / TBC1 domain family member 1 / Q60949* / Q86TI0*ENSGALG0000003938020
TBC1D4 / TBC1 domain family member 4 / O60343*ENSGALG0000001692519
TBC1D14 / TBC1 domain family member 14 / Q9P2M4*ENSGALG0000001554612
TBC1D12 / TBC1 domain family member 12 / O60347*ENSGALG0000003404410


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR009057  Homeobox-like domain superfamily
 IPR011993  PH-like domain superfamily
 IPR022164  Kinesin-like
 IPR033185  Rab GTPase-activating protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043087 regulation of GTPase activity IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000017320 RAB6A / Q1KME6 / Ras-related protein Rab-6A / RAB6D* / RAB6C* / Q9H0N0* / P35279* / P20340* / RAB6A, member RAS oncogene family* / RAB6D, member RAS oncogene family* / RAB6C, member RAS on...  / complex / reaction






 

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