ENSDARG00000101602


Danio rerio

Features
Gene ID: ENSDARG00000101602
  
Biological name :preb
  
Synonyms : preb / prolactin regulatory element binding
  
Possible biological names infered from orthology : Q9HCU5 / Q9WUQ2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 2565433
Gene end: 2583278
  
Corresponding Affymetrix probe sets: Dr.10354.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000137671
Ensembl peptide - ENSDARP00000157187
NCBI entrez gene - 436911     See in Manteia.
swissprot - Q6DHN1
ZFIN ID - ZDB-GENE-040718-385
Ensembl - ENSDARG00000101602
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PREBENSGALG00000029369Gallus gallus
 PREBENSG00000138073Homo sapiens
 PrebENSMUSG00000045302Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000008184 mia3 / melanoma inhibitory activity family, member 3 / Q5JRA6* / transport and Golgi organization * / MIA family member 3, ER export factor*  / complex / reaction
 ENSDARG00000103516 sec24c / SEC24 homolog C, COPII coat complex component / P53992* / Sec24 related gene family, member C (S. cerevisiae)*  / complex / reaction
 ENSDARG00000104230 Q7SZE5 / sec23a / Sec23 homolog A, COPII coat complex component / Q15436* / Q01405* / Protein transport protein Sec23A * / Sec23 homolog A, coat complex II component*  / complex / reaction
 ENSDARG00000103403 sar1b / secretion associated, Ras related GTPase 1B / Q9Y6B6*  / reaction






 

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contact: otassy@igbmc.fr