ENSDARG00000102254


Danio rerio

Features
Gene ID: ENSDARG00000102254
  
Biological name :pycr1a
  
Synonyms : pycr1a / pyrroline-5-carboxylate reductase 1a
  
Possible biological names infered from orthology : AL117348.2 / P32322 / PYCR1 / PYCR2 / pyrroline-5-carboxylate reductase 1 / pyrroline-5-carboxylate reductase 2 / pyrroline-5-carboxylate reductase family, member 2 / Q922Q4 / Q922W5 / Q96C36
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 57997980
Gene end: 58006138
  
Corresponding Affymetrix probe sets: Dr.6047.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133333
Ensembl peptide - ENSDARP00000147896
NCBI entrez gene - 393799     See in Manteia.
RefSeq - NM_200826
RefSeq Peptide - NP_957120
swissprot - Q6P971
ZFIN ID - ZDB-GENE-040426-1675
Ensembl - ENSDARG00000102254
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PYCR1ENSGALG00000007300Gallus gallus
 AL117348.2ENSG00000255835Homo sapiens
 PYCR1ENSG00000183010Homo sapiens
 PYCR2ENSG00000143811Homo sapiens
 Pycr1ENSMUSG00000025140Mus musculus
 Pycr2ENSMUSG00000026520Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pycr1b / pyrroline-5-carboxylate reductase 1b / PYCR2* / PYCR1* / Q922W5* / P32322* / Q96C36* / Q922Q4* / AL117348.2* / pyrroline-5-carboxylate reductase 2* / pyrroline-5-carboxylate reduct...ENSDARG0000009863986
pycr3 / Q5SPD7 / pyrroline-5-carboxylate reductase 3 / Pycrl* / Q53H96* / Q9DCC4*ENSDARG0000001523636


Protein motifs (from Interpro)
Interpro ID Name
 IPR000304  Pyrroline-5-carboxylate reductase
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR016040  NAD(P)-binding domain
 IPR028939  Pyrroline-5-carboxylate reductase, catalytic, N-terminal
 IPR029036  Pyrroline-5-carboxylate reductase, dimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006561 proline biosynthetic process IEA
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0055129 L-proline biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004735 pyrroline-5-carboxylate reductase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Amino acid synthesis and interconversion (transamination)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000105 epidermis epidermis atrophied , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism apoptotic , abnormal
whole organism malformed , abnormal
Show

 ZFA:0001117 post-vent region post-vent region increased curvature , abnormal
post-vent region curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000098639 pycr1b / pyrroline-5-carboxylate reductase 1b / PYCR2* / PYCR1* / Q922W5* / P32322* / Q96C36* / Q922Q4* / AL117348.2* / pyrroline-5-carboxylate reductase 2* / pyrroline-5-carboxylate reduct...  / complex
 ENSDARG00000102254 pycr1a / pyrroline-5-carboxylate reductase 1a / PYCR2* / PYCR1* / Q922W5* / P32322* / Q96C36* / Q922Q4* / AL117348.2* / pyrroline-5-carboxylate reductase 2* / pyrroline-5-carboxylate reduct...  / complex






 

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