ENSDARG00000102538


Danio rerio

Features
Gene ID: ENSDARG00000102538
  
Biological name :mccc1
  
Synonyms : mccc1 / methylcrotonoyl-CoA carboxylase 1 (alpha)
  
Possible biological names infered from orthology : methylcrotonoyl-CoA carboxylase 1 / Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial / Q96RQ3 / Q99MR8
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 36875400
Gene end: 36899777
  
Corresponding Affymetrix probe sets: Dr.22552.1.A1_at (Zebrafish Array)   NM_001044915_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132399
NCBI entrez gene - 777632     See in Manteia.
RefSeq - NM_001044915
RefSeq Peptide - NP_001038380
swissprot - A0A0R4IH35
ZFIN ID - ZDB-GENE-050208-450
Ensembl - ENSDARG00000102538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCCC1ENSGALG00000008785Gallus gallus
 MCCC1ENSG00000078070Homo sapiens
 Mccc1ENSMUSG00000027709Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcca / propionyl CoA carboxylase, alpha polypeptide / Q96GG9* / P05165* / Q91ZA3* / DCUN1D1* / propionyl-CoA carboxylase alpha subunit* / propionyl-Coenzyme A carboxylase, alpha polypeptide...ENSDARG0000002898232


Protein motifs (from Interpro)
Interpro ID Name
 IPR000089  Biotin/lipoyl attachment
 IPR001882  Biotin-binding site
 IPR005479  Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
 IPR005481  Biotin carboxylase-like, N-terminal domain
 IPR005482  Biotin carboxylase, C-terminal
 IPR011053  Single hybrid motif
 IPR011054  Rudiment single hybrid motif
 IPR011761  ATP-grasp fold
 IPR011764  Biotin carboxylation domain
 IPR013815  ATP-grasp fold, subdomain 1
 IPR016185  Pre-ATP-grasp domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Biotin transport and metabolism
Branched-chain amino acid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000102538 mccc1 / methylcrotonoyl-CoA carboxylase 1 (alpha) / Q96RQ3* / Q99MR8* / methylcrotonoyl-CoA carboxylase 1* / Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial *  / complex






 

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