ENSDARG00000109287


Danio rerio

Features
Gene ID: ENSDARG00000109287
  
Biological name :CABZ01078261.1
  
Synonyms : CABZ01078261.1
  
Possible biological names infered from orthology : HMBOX1 / homeobox containing 1 / Mus musculus homeobox containing 1 (Hmbox1), transcript variant 3, mRNA. / Q6NT76 / Q8BJA3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 49787584
Gene end: 49804597
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000144668
Ensembl peptide - ENSDARP00000145008
Ensembl peptide - ENSDARP00000147864
Ensembl peptide - ENSDARP00000153872
Ensembl peptide - ENSDARP00000154081
Ensembl - ENSDARG00000109287
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMBOX1ENSGALG00000016633Gallus gallus
 HMBOX1ENSG00000147421Homo sapiens
 Hmbox1ENSMUSG00000021972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hmbox1a / homeobox containing 1a / HMBOX1* / Q6NT76* / Q8BJA3* / homeobox containing 1* / Mus musculus homeobox containing 1 (Hmbox1), transcript variant 3, mRNA.*ENSDARG0000002708275
zgc:91944ENSDARG0000003588749
hnf1ba / HNF1 homeobox Ba / HNF1B* / P35680* / P27889* / HNF1 homeobox B* / Hepatocyte nuclear factor 1-beta *ENSDARG0000000661521
Q8UW00 / hnf1bb / HNF1 homeobox Bb / HNF1B* / P27889* / P35680* / HNF1 homeobox B* / Hepatocyte nuclear factor 1-beta *ENSDARG0000002229520
hnf1a / HNF1 homeobox aENSDARG0000000947018


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006899  Hepatocyte nuclear factor 1, N-terminal
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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