ENSG00000007376


Homo sapiens

Features
Gene ID: ENSG00000007376
  
Biological name :RPUSD1
  
Synonyms : Q9UJJ7 / RNA pseudouridylate synthase domain containing 1 / RPUSD1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 784974
Gene end: 788397
  
Corresponding Affymetrix probe sets: 226078_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458059
Ensembl peptide - ENSP00000457527
Ensembl peptide - ENSP00000456692
Ensembl peptide - ENSP00000456545
Ensembl peptide - ENSP00000456231
Ensembl peptide - ENSP00000455862
Ensembl peptide - ENSP00000455026
Ensembl peptide - ENSP00000454616
Ensembl peptide - ENSP00000007264
Ensembl peptide - ENSP00000457722
NCBI entrez gene - 113000     See in Manteia.
RefSeq - NM_058192
RefSeq - NM_001324086
RefSeq - NM_001324410
RefSeq - NM_001324411
RefSeq - NM_001324412
RefSeq - NM_001324413
RefSeq - NM_001324414
RefSeq - NM_001324415
RefSeq Peptide - NP_001311015
RefSeq Peptide - NP_478072
RefSeq Peptide - NP_001311344
RefSeq Peptide - NP_001311343
RefSeq Peptide - NP_001311342
RefSeq Peptide - NP_001311341
RefSeq Peptide - NP_001311340
RefSeq Peptide - NP_001311339
swissprot - Q9UJJ7
swissprot - H3BMZ6
swissprot - H3BQN8
swissprot - H3BRG3
swissprot - H3BS55
swissprot - H3BSG4
swissprot - H3BU91
swissprot - H3BUN6
swissprot - H3BVD0
Ensembl - ENSG00000007376
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpusd1ENSDARG00000060192Danio rerio
 RPUSD1ENSGALG00000005315Gallus gallus
 Q8VCZ8ENSMUSG00000041199Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000455 enzyme-directed rRNA pseudouridine synthesis IBA
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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