ENSMUSG00000041199


Mus musculus
Rpusd1synthasesynthesisrnaactivityrsuarlubcdefcatalyticdomainsuperfamilyenzyme-directedrrnamodificationtrnabindingdeaminase

Features
Gene ID: ENSMUSG00000041199
  
Biological name :Rpusd1
  
Synonyms : Q8VCZ8 / RNA pseudouridylate synthase domain-containing protein 1 / Rpusd1
  
Possible biological names infered from orthology : Q9UJJ7 / RNA pseudouridylate synthase domain containing 1
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A3.3
Gene start: 25727751
Gene end: 25731456
  
Corresponding Affymetrix probe sets: 10442834 (MoGene1.0st)   1453253_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043825
NCBI entrez gene - 106707     See in Manteia.
MGI - MGI:1919186
RefSeq - XM_006523418
RefSeq - NM_028009
RefSeq - XM_006523414
RefSeq - XM_006523416
RefSeq Peptide - NP_082285
swissprot - Q8VCZ8
Ensembl - ENSMUSG00000041199
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpusd1ENSDARG00000060192Danio rerio
 RPUSD1ENSGALG00000005315Gallus gallus
 Q9UJJ7ENSG00000007376Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
nitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processcellular component biogenesicellular component biogenesiscellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityhydrolase activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingisomerase activityisomerase activityhydrolase activityhydrolase activity
TypeGO IDTermEv.Code
 biological_processGO:0000455 enzyme-directed rRNA pseudouridine synthesis IBA
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr