ENSGALG00000005315


Gallus gallus

Features
Gene ID: ENSGALG00000005315
  
Biological name :RPUSD1
  
Synonyms : RNA pseudouridylate synthase domain containing 1 / RPUSD1
  
Possible biological names infered from orthology : Q8VCZ8 / Q9UJJ7 / RNA pseudouridylate synthase domain-containing protein 1
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6017339
Gene end: 6019278
  
Corresponding Affymetrix probe sets: Gga.8055.1.S1_at (Chicken Array)   Gga.8055.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008504
NCBI entrez gene - 771031     See in Manteia.
RefSeq - XM_003642118
RefSeq - XM_004945220
swissprot - E1C0L7
Ensembl - ENSGALG00000005315
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpusd1ENSDARG00000060192Danio rerio
 Q9UJJ7ENSG00000007376Homo sapiens
 Q8VCZ8ENSMUSG00000041199Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000455 enzyme-directed rRNA pseudouridine synthesis IBA
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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