ENSG00000079112


Homo sapiens
cellCDH17membraneadhesionplasmabdifferentiationoligopeptidebindingcadherintransportviamoleculesintegrinsurfaceadherensjunctiontransmembranetransporteractivityioncadherin-likeconservedsitegerminalcentermarginalzonehomophilicintegrin-mediatedsignaling

Features
Gene ID: ENSG00000079112
  
Biological name :CDH17
  
Synonyms : cadherin 17 / CDH17 / Q12864
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q22.1
Gene start: 94127171
Gene end: 94217303
  
Corresponding Affymetrix probe sets: 209847_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000392811
Ensembl peptide - ENSP00000429730
Ensembl peptide - ENSP00000428189
Ensembl peptide - ENSP00000401468
Ensembl peptide - ENSP00000027335
NCBI entrez gene - 1015     See in Manteia.
OMIM - 603017
RefSeq - XM_011516790
RefSeq - NM_001144663
RefSeq - NM_004063
RefSeq Peptide - NP_001138135
RefSeq Peptide - NP_004054
swissprot - Q12864
swissprot - E7EN24
swissprot - E5RJT3
swissprot - H0YBL0
Ensembl - ENSG00000079112
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh17ENSDARG00000005112Danio rerio
 CDH17ENSGALG00000035094Gallus gallus
 Cdh17ENSMUSG00000028217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH16 / O75309 / cadherin 16ENSG0000016658927


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
immune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune responseanatomical structure developmentcellular developmental processcell activationimmune effector processestablishment of localizationcell adhesioncell communicationcellular response to stimuluscellular component organizationcellular component biogenesisimmune respoimmune responseanatomical sanatomical structure developmentcellular devcellular developmental processcell activatcell activationimmune effecimmune effector processestablishmenestablishment of localizationcell adhesiocell adhesioncell communicell communicationcellular rescellular response to stimuluscellular comcellular component organizationcellular comcellular component biogenesis
protein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein-containing complex bindingtransmembrane transporter activityion bindingprotein bindingprotein bindingprotein-containing complex bindingprotein-containing complex bindingtransmembrane transporter activitytransmembrane transporter activityion bindingion binding
cellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellorganellemembranecell junctioncellcellorganelleorganellemembranemembranecell junctioncell junction
TypeGO IDTermEv.Code
 biological_processGO:0002314 germinal center B cell differentiation IEA
 biological_processGO:0002315 marginal zone B cell differentiation IEA
 biological_processGO:0006857 oligopeptide transport ISS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IMP
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules ISS
 biological_processGO:0030183 B cell differentiation IEA
 biological_processGO:0033626 positive regulation of integrin activation by cell surface receptor linked signal transduction IMP
 biological_processGO:0034332 adherens junction organization TAS
 biological_processGO:0035672 oligopeptide transmembrane transport ISS
 biological_processGO:0048536 spleen development IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 cellular_componentGO:0030054 cell junction IDA
 molecular_functionGO:0005178 integrin binding IPI
 molecular_functionGO:0005215 transporter activity TAS
 molecular_functionGO:0005427 proton-dependent oligopeptide secondary active transmembrane transporter activity ISS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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