ENSGALG00000035094


Gallus gallus

Features
Gene ID: ENSGALG00000035094
  
Biological name :CDH17
  
Synonyms : cadherin 17 / CDH17
  
Possible biological names infered from orthology : Q12864 / Q9R100
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 126538859
Gene end: 126565346
  
Corresponding Affymetrix probe sets: Gga.10479.1.S1_s_at (Chicken Array)   GgaAffx.10166.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044448
NCBI entrez gene - 420225     See in Manteia.
RefSeq - NM_001199495
RefSeq - XM_015282915
RefSeq Peptide - NP_001186424
swissprot - A0A1D5NVS2
Ensembl - ENSGALG00000035094
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh17ENSDARG00000005112Danio rerio
 CDH17ENSG00000079112Homo sapiens
 Cdh17ENSMUSG00000028217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002314 germinal center B cell differentiation IEA
 biological_processGO:0002315 marginal zone B cell differentiation IEA
 biological_processGO:0006857 oligopeptide transport IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0030183 B cell differentiation IEA
 biological_processGO:0033626 positive regulation of integrin activation by cell surface receptor linked signal transduction IEA
 biological_processGO:0048536 spleen development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005178 integrin binding IEA
 molecular_functionGO:0005427 proton-dependent oligopeptide secondary active transmembrane transporter activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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