ENSG00000166160


Homo sapiens

Features
Gene ID: ENSG00000166160
  
Biological name :OPN1MW2
  
Synonyms : OPN1MW2 / opsin 1, medium wave sensitive 2 / P0DN77
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q28
Gene start: 154219756
Gene end: 154233286
  
Corresponding Affymetrix probe sets: 221327_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358945
Ensembl peptide - ENSP00000403023
NCBI entrez gene - 101060233     See in Manteia.
NCBI entrez gene - 107984055     See in Manteia.
NCBI entrez gene - 728458     See in Manteia.
RefSeq - XM_016999980
RefSeq - NM_001048181
RefSeq - NM_001330067
RefSeq Peptide - NP_001041646
RefSeq Peptide - NP_001316996
swissprot - P0DN77
swissprot - H0Y642
Ensembl - ENSG00000166160
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8AYN0ENSDARG00000044861Danio rerio
 Q9W6A7ENSDARG00000044862Danio rerio
 OPNPENSGALG00000004924Gallus gallus
 O35599ENSMUSG00000031394Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPN1MW / P04001 / opsin 1, medium wave sensitiveENSG00000268221100
P0DN78 / OPN1MW3 / opsin 1, medium wave sensitive 3ENSG00000269433100
OPN1LW / P04000 / opsin 1, long wave sensitiveENSG0000010207696
OPN1SW / P03999 / opsin 1, short wave sensitiveENSG0000012861741
RHO / P08100 / rhodopsinENSG0000016391441
OPN3 / Q9H1Y3 / opsin 3ENSG0000005427726
OPN4 / Q9UHM6 / opsin 4ENSG0000012237525
RRH / O14718 / retinal pigment epithelium-derived rhodopsin homologENSG0000018024523
OPN5 / Q6U736 / opsin 5ENSG0000012481821


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR000378  Opsin red/green sensitive
 IPR001760  Opsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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