ENSG00000180245


Homo sapiens

Features
Gene ID: ENSG00000180245
  
Biological name :RRH
  
Synonyms : O14718 / retinal pigment epithelium-derived rhodopsin homolog / RRH
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q25
Gene start: 109827994
Gene end: 109844604
  
Corresponding Affymetrix probe sets: 208314_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000314992
NCBI entrez gene - 10692     See in Manteia.
OMIM - 605224
RefSeq - NM_006583
RefSeq Peptide - NP_006574
swissprot - O14718
Ensembl - ENSG00000180245
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrhENSDARG00000039534Danio rerio
 RRHENSGALG00000012181Gallus gallus
 RrhENSMUSG00000028012Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPN3 / Q9H1Y3 / opsin 3ENSG0000005427728
OPN4 / Q9UHM6 / opsin 4ENSG0000012237528
OPN5 / Q6U736 / opsin 5ENSG0000012481826
OPN1LW / P04000 / opsin 1, long wave sensitiveENSG0000010207625
RHO / P08100 / rhodopsinENSG0000016391425
P0DN77 / OPN1MW2 / opsin 1, medium wave sensitive 2ENSG0000016616025
OPN1MW / P04001 / opsin 1, medium wave sensitiveENSG0000026822125
P0DN78 / OPN1MW3 / opsin 1, medium wave sensitive 3ENSG0000026943325
OPN1SW / P03999 / opsin 1, short wave sensitiveENSG0000012861723


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002962  Peropsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site
 IPR032972  Visual pigment-like receptor peropsin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity TAS
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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