ENSGALG00000012181


Gallus gallus

Features
Gene ID: ENSGALG00000012181
  
Biological name :RRH
  
Synonyms : RRH / visual pigment-like receptor peropsin
  
Possible biological names infered from orthology : O14718 / O35214 / retinal pigment epithelium-derived rhodopsin homolog
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 58473460
Gene end: 58484571
  
Corresponding Affymetrix probe sets: GgaAffx.20098.1.S1_at (Chicken Array)   GgaAffx.7723.3.S1_at (Chicken Array)   GgaAffx.7723.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019862
NCBI entrez gene - 771805     See in Manteia.
RefSeq - NM_001079759
RefSeq Peptide - NP_001073227
swissprot - F1NEL9
Ensembl - ENSGALG00000012181
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrhENSDARG00000039534Danio rerio
 RRHENSG00000180245Homo sapiens
 RrhENSMUSG00000028012Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPN5L1ENSGALG0000001515329
OPNVA / vertebrate ancient opsin isoform 2 ENSGALG0000001051327
OPN3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSGALG0000001076227
OPN5L2ENSGALG0000001669927
OPN5 / opsin-5 / Q6U736* / Q6VZZ7*ENSGALG0000001672527
ENSGALG0000002762427
Gallus gallus pinopsin-like (LOC771085), mRNA.ENSGALG0000001680226
RHO / rhodopsin / P08100* / P15409*ENSGALG0000002074526
OPN4 / melanopsin / Q9QXZ9* / Q9UHM6* / opsin 4*ENSGALG0000000193425
OPNP / OPN1LW* / OPN1MW* / P0DN78* / O35599* / P04000* / P04001* / P0DN77* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive* / Medium-wave-sensitive opsin 1 * / opsin 1, medium wave sen...ENSGALG0000000492425
OPN4-1 / photopigment melanopsin-like ENSGALG0000004166225
P28683 / OPN1MSW / Green-sensitive opsin ENSGALG0000000284823


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002962  Peropsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site
 IPR032972  Visual pigment-like receptor peropsin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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