ENSGALG00000002848


Gallus gallus

Features
Gene ID: ENSGALG00000002848
  
Biological name :OPN1MSW
  
Synonyms : Green-sensitive opsin / OPN1MSW / P28683
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 4557195
Gene end: 4562767
  
Corresponding Affymetrix probe sets: Gga.852.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004483
NCBI entrez gene - 396486     See in Manteia.
RefSeq - NM_205490
RefSeq Peptide - NP_990821
swissprot - P28683
Ensembl - ENSGALG00000002848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opn1mw2ENSDARG00000044280Danio rerio
 Q8AYM7ENSDARG00000044279Danio rerio
 Q9W6A5ENSDARG00000097008Danio rerio
 Q9W6A6ENSDARG00000000638Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RHO / rhodopsin / P08100* / P15409*ENSGALG0000002074573
OPNP / OPN1LW* / OPN1MW* / P0DN78* / O35599* / P04000* / P04001* / P0DN77* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive* / Medium-wave-sensitive opsin 1 * / opsin 1, medium wave sen...ENSGALG0000000492445
OPNVA / vertebrate ancient opsin isoform 2 ENSGALG0000001051339
OPN3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSGALG0000001076228
Gallus gallus pinopsin-like (LOC771085), mRNA.ENSGALG0000001680227
OPN4-1 / photopigment melanopsin-like ENSGALG0000004166226
OPN4 / melanopsin / Q9QXZ9* / Q9UHM6* / opsin 4*ENSGALG0000000193425
OPN5L1ENSGALG0000001515325
ENSGALG0000002762424
RRH / visual pigment-like receptor peropsin / O14718* / O35214* / retinal pigment epithelium-derived rhodopsin homolog*ENSGALG0000001218122
OPN5L2ENSGALG0000001669922
OPN5 / opsin-5 / Q6U736* / Q6VZZ7*ENSGALG0000001672522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR000732  Rhodopsin
 IPR001760  Opsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR019477  Rhodopsin, N-terminal
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0016037 light absorption IDA
 biological_processGO:0016038 absorption of visible light IDA
 biological_processGO:0018298 protein-chromophore linkage IDA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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