ENSG00000204219


Homo sapiens

Features
Gene ID: ENSG00000204219
  
Biological name :TCEA3
  
Synonyms : O75764 / TCEA3 / transcription elongation factor A3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.12
Gene start: 23381061
Gene end: 23424740
  
Corresponding Affymetrix probe sets: 226388_at (Human Genome U133 Plus 2.0 Array)   241976_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363729
Ensembl peptide - ENSP00000406293
Ensembl peptide - ENSP00000474530
Ensembl peptide - ENSP00000474977
NCBI entrez gene - 6920     See in Manteia.
OMIM - 604128
RefSeq - XM_017002204
RefSeq - NM_003196
RefSeq - XM_017002200
RefSeq - XM_017002201
RefSeq - XM_017002202
RefSeq - XM_017002203
RefSeq - XM_006710864
RefSeq - XM_011542053
RefSeq Peptide - NP_003187
swissprot - O75764
swissprot - S4R3M9
swissprot - S4R419
Ensembl - ENSG00000204219
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcea3ENSDARG00000004724Danio rerio
 Tcea3ENSMUSG00000001604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TCEA1 / P23193 / transcription elongation factor A1ENSG0000018773551
TCEA2 / Q15560 / transcription elongation factor A2ENSG0000017170349
Q8N8B7 / TCEANC / transcription elongation factor A N-terminal and central domain containingENSG0000017689628


Protein motifs (from Interpro)
Interpro ID Name
 IPR001222  Zinc finger, TFIIS-type
 IPR003617  Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
 IPR003618  Transcription elongation factor S-II, central domain
 IPR006289  Transcription elongation factor, TFIIS
 IPR017923  Transcription factor IIS, N-terminal
 IPR035100  Transcription elongation factor, IIS-type
 IPR035441  TFIIS/LEDGF domain superfamily
 IPR036575  Transcription elongation factor S-II, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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