ENSGALG00000001449


Gallus gallus

Features
Gene ID: ENSGALG00000001449
  
Biological name :STRA6
  
Synonyms : stimulated by retinoic acid 6 / STRA6
  
Possible biological names infered from orthology : Q9BX79 / stimulated by retinoic acid gene 6
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 2519526
Gene end: 2529895
  
Corresponding Affymetrix probe sets: Gga.7473.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002201
NCBI entrez gene - 415301     See in Manteia.
RefSeq - XM_015278811
RefSeq - NM_001293202
RefSeq - XM_004943697
RefSeq - XM_015278809
RefSeq - XM_004943696
RefSeq Peptide - NP_001280131
swissprot - F1NSC4
Ensembl - ENSGALG00000001449
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stra6ENSDARG00000051874Danio rerio
 STRA6ENSG00000137868Homo sapiens
 Stra6ENSMUSG00000032327Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026612  Receptor for retinol uptake STRA6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001568 blood vessel development IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0003184 pulmonary valve morphogenesis IEA
 biological_processGO:0003281 ventricular septum development IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0007612 learning IEA
 biological_processGO:0007631 feeding behavior IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030325 adrenal gland development IEA
 biological_processGO:0030540 female genitalia development IEA
 biological_processGO:0034633 retinol transport IEA
 biological_processGO:0035461 vitamin transmembrane transport IEA
 biological_processGO:0042297 vocal learning IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0043583 ear development IEA
 biological_processGO:0043585 nose morphogenesis IEA
 biological_processGO:0048286 lung alveolus development IEA
 biological_processGO:0048520 positive regulation of behavior IEA
 biological_processGO:0048546 digestive tract morphogenesis IEA
 biological_processGO:0048566 embryonic digestive tract development IEA
 biological_processGO:0048589 developmental growth IEA
 biological_processGO:0048745 smooth muscle tissue development IEA
 biological_processGO:0048844 artery morphogenesis IEA
 biological_processGO:0050890 cognition IEA
 biological_processGO:0050905 neuromuscular process IEA
 biological_processGO:0060322 head development IEA
 biological_processGO:0060323 head morphogenesis IEA
 biological_processGO:0060325 face morphogenesis IEA
 biological_processGO:0060426 lung vasculature development IEA
 biological_processGO:0060539 diaphragm development IEA
 biological_processGO:0060900 embryonic camera-type eye formation IEA
 biological_processGO:0061029 eyelid development in camera-type eye IEA
 biological_processGO:0061038 uterus morphogenesis IEA
 biological_processGO:0061143 alveolar primary septum development IEA
 biological_processGO:0061156 pulmonary artery morphogenesis IEA
 biological_processGO:0061205 paramesonephric duct development IEA
 biological_processGO:0097070 ductus arteriosus closure IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0034632 retinol transmembrane transporter activity IEA
 molecular_functionGO:0090482 vitamin transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000006629 RBP4A / P41263 / Retinol-binding protein 4 / RBP4* / Q00724* / P02753*  / complex / reaction
 ENSGALG00000015143 TTR / P27731 / Transthyretin / P02766* / P07309*  / complex / reaction






 

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