ENSGALG00000006629


Gallus gallus

Features
Gene ID: ENSGALG00000006629
  
Biological name :RBP4A
  
Synonyms : P41263 / RBP4A / Retinol-binding protein 4
  
Possible biological names infered from orthology : P02753 / Q00724 / RBP4
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 20385382
Gene end: 20390788
  
Corresponding Affymetrix probe sets: Gga.4126.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057089
Ensembl peptide - ENSGALP00000010694
NCBI entrez gene - 396166     See in Manteia.
RefSeq - NM_205238
RefSeq Peptide - NP_990569
swissprot - P41263
swissprot - A0A1D5PVW1
Ensembl - ENSGALG00000006629
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbp4ENSDARG00000101199Danio rerio
 RBP4ENSG00000138207Homo sapiens
 Rbp4ENSMUSG00000024990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBP4 / P08938 / Purpurin ENSGALG0000001537449


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR002449  Retinol binding protein/Purpurin
 IPR012674  Calycin
 IPR022271  Lipocalin, ApoD type
 IPR022272  Lipocalin family conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001555 oocyte growth IEP
 biological_processGO:0001654 eye development IEA
 biological_processGO:0006094 gluconeogenesis IEA
 biological_processGO:0009615 response to virus IDA
 biological_processGO:0030277 maintenance of gastrointestinal epithelium IEA
 biological_processGO:0032024 positive regulation of insulin secretion IEA
 biological_processGO:0032526 response to retinoic acid IEA
 biological_processGO:0033189 response to vitamin A IDA
 biological_processGO:0034633 retinol transport IEA
 biological_processGO:0042572 retinol metabolic process IEA
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0043627 response to estrogen IDA
 biological_processGO:0065003 protein-containing complex assembly IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IDA
 cellular_componentGO:0060417 yolk IDA
 cellular_componentGO:0060418 yolk plasma IDA
 cellular_componentGO:0070062 extracellular exosome ISM
 molecular_functionGO:0005102 signaling receptor binding IDA
 molecular_functionGO:0005501 retinoid binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016918 retinal binding IEA
 molecular_functionGO:0019841 retinol binding IEA
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0034632 retinol transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001449 STRA6 / stimulated by retinoic acid 6 / Q9BX79* / stimulated by retinoic acid gene 6*  / complex / reaction
 ENSGALG00000015143 TTR / P27731 / Transthyretin / P02766* / P07309*  / complex / reaction






 

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