ENSGALG00000001695


Gallus gallus

Features
Gene ID: ENSGALG00000001695
  
Biological name :GABRA6
  
Synonyms : GABRA6 / Gamma-aminobutyric acid receptor subunit alpha-6 / Q90845
  
Possible biological names infered from orthology : gamma-aminobutyric acid type A receptor alpha6 subunit / P16305 / Q16445
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 7282000
Gene end: 7303586
  
Corresponding Affymetrix probe sets: Gga.550.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002598
NCBI entrez gene - 395931     See in Manteia.
RefSeq - NM_205058
RefSeq Peptide - NP_990389
swissprot - Q90845
Ensembl - ENSGALG00000001695
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabra6aENSDARG00000075058Danio rerio
 gabra6bENSDARG00000058736Danio rerio
 GABRA6ENSG00000145863Homo sapiens
 Gabra6ENSMUSG00000020428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABRA4 / gamma-aminobutyric acid type A receptor alpha4 subunit / P48169* / Q9D6F4* / Gamma-aminobutyric acid receptor subunit alpha-4 *ENSGALG0000001420269
GABRA5 / gamma-aminobutyric acid type A receptor alpha5 subunit / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 *ENSGALG0000001674456
P19150 / GABRA1 / Gamma-aminobutyric acid receptor subunit alpha-1 / P62812* / P14867* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GAB...ENSGALG0000000169855
GABRA3 / gamma-aminobutyric acid type A receptor alpha3 subunit / P26049* / P34903* / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA.*ENSGALG0000000726955
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P26048* / P47869* / Gamma-aminobutyric acid receptor subunit alpha-2 *ENSGALG0000001420654
GABRG1 / gamma-aminobutyric acid type A receptor gamma1 subunit / Q8N1C3* / Q9R0Y8* / Gamma-aminobutyric acid receptor subunit gamma-1 *ENSGALG0000002014343
GABRG2 / P21548 / Gamma-aminobutyric acid receptor subunit gamma-2 / P22723* / P18507* / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSGALG0000003804243
GABRE / P34904 / Gamma-aminobutyric acid receptor subunit gamma-4 ENSGALG0000002029240
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000004104222
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000003929318
ENSGALG000000142007


Protein motifs (from Interpro)
Interpro ID Name
 IPR001390  Gamma-aminobutyric-acid A receptor, alpha subunit
 IPR005436  Gamma-aminobutyric-acid A receptor, alpha 6 subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:1902711 GABA-A receptor complex IBA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IBA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
GABA A receptor activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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