ENSGALG00000003985


Gallus gallus

Features
Gene ID: ENSGALG00000003985
  
Biological name :TARSL2
  
Synonyms : TARSL2 / threonyl-tRNA synthetase like 2
  
Possible biological names infered from orthology : A2RTX5 / Probable threonine--tRNA ligase 2, cytoplasmic / Q8BLY2
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 6152161
Gene end: 6167756
  
Corresponding Affymetrix probe sets: Gga.11029.1.S1_at (Chicken Array)   Gga.11029.1.S1_s_at (Chicken Array)   Gga.5278.2.S1_a_at (Chicken Array)   GgaAffx.2478.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006337
NCBI entrez gene - 415389     See in Manteia.
RefSeq - NM_001293222
RefSeq Peptide - NP_001280151
swissprot - F1P372
Ensembl - ENSGALG00000003985
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tarsl2ENSDARG00000092774Danio rerio
 A2RTX5ENSG00000185418Homo sapiens
 Q8BLY2ENSMUSG00000030515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TARS / threonine--tRNA ligase, cytoplasmic / P26639* / Q9D0R2* / threonyl-tRNA synthetase*ENSGALG0000000328869
TARS2 / threonyl-tRNA synthetase 2, mitochondrial / Q3UQ84* / Q9BW92* / Threonine--tRNA ligase, mitochondrial *ENSGALG0000004341650
MRPL39 / mitochondrial ribosomal protein L39 / Q9JKF7* / Q9NYK5* / 39S ribosomal protein L39, mitochondrial *ENSGALG0000001574210


Protein motifs (from Interpro)
Interpro ID Name
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002320  Threonine-tRNA ligase, class IIa
 IPR004095  TGS
 IPR004154  Anticodon-binding
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR012675  Beta-grasp domain superfamily
 IPR012676  TGS-like
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006435 threonyl-tRNA aminoacylation IBA
 biological_processGO:0043039 tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004829 threonine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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