ENSMUSG00000030515


Mus musculus

Features
Gene ID: ENSMUSG00000030515
  
Biological name :Tarsl2
  
Synonyms : Probable threonine--tRNA ligase 2, cytoplasmic / Q8BLY2 / Tarsl2
  
Possible biological names infered from orthology : A2RTX5 / threonyl-tRNA synthetase like 2
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: C
Gene start: 65644898
Gene end: 65692091
  
Corresponding Affymetrix probe sets: 10553935 (MoGene1.0st)   1434738_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000032728
NCBI entrez gene - 272396     See in Manteia.
MGI - MGI:2444486
RefSeq - NM_172310
RefSeq Peptide - NP_758514
swissprot - Q8BLY2
Ensembl - ENSMUSG00000030515
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tarsl2ENSDARG00000092774Danio rerio
 TARSL2ENSGALG00000003985Gallus gallus
 A2RTX5ENSG00000185418Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tars / Q9D0R2 / Threonine--tRNA ligase, cytoplasmic / P26639* / threonyl-tRNA synthetase*ENSMUSG0000002224164
Tars2 / Q3UQ84 / Threonine--tRNA ligase, mitochondrial / Q9BW92* / threonyl-tRNA synthetase 2, mitochondrial*ENSMUSG0000002810748
Mrpl39 / Q9JKF7 / 39S ribosomal protein L39, mitochondrial / Q9NYK5* / mitochondrial ribosomal protein L39*ENSMUSG0000002288910


Protein motifs (from Interpro)
Interpro ID Name
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002320  Threonine-tRNA ligase, class IIa
 IPR004095  TGS
 IPR004154  Anticodon-binding
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR012675  Beta-grasp domain superfamily
 IPR012676  TGS-like
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR033728  Threonine-tRNA ligase catalytic core domain
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006435 threonyl-tRNA aminoacylation IBA
 biological_processGO:0043039 tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004829 threonine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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