ENSDARG00000092774


Danio rerio

Features
Gene ID: ENSDARG00000092774
  
Biological name :tarsl2
  
Synonyms : tarsl2 / threonyl-tRNA synthetase-like 2
  
Possible biological names infered from orthology : A2RTX5 / Probable threonine--tRNA ligase 2, cytoplasmic / Q8BLY2
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 210838
Gene end: 226800
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115950
Ensembl peptide - ENSDARP00000138354
swissprot - A0A0R4ISX2
swissprot - B8JMZ8
ZFIN ID - ZDB-GENE-081104-490
Ensembl - ENSDARG00000092774
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TARSL2ENSGALG00000003985Gallus gallus
 A2RTX5ENSG00000185418Homo sapiens
 Q8BLY2ENSMUSG00000030515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tars / threonyl-tRNA synthetase / P26639* / Q9D0R2* / Threonine--tRNA ligase, cytoplasmic *ENSDARG0000001325079
LO017852.1 / TARS2* / Q9BW92* / threonyl-tRNA synthetase 2, mitochondrial*ENSDARG0000007538564
mrpl39 / mitochondrial ribosomal protein L39 / Q9JKF7* / Q9NYK5* / 39S ribosomal protein L39, mitochondrial *ENSDARG000000415702


Protein motifs (from Interpro)
Interpro ID Name
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002320  Threonine-tRNA ligase, class IIa
 IPR004154  Anticodon-binding
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR033728  Threonine-tRNA ligase catalytic core domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006435 threonyl-tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004829 threonine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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