ENSDARG00000075385


Danio rerio

Features
Gene ID: ENSDARG00000075385
  
Biological name :LO017852.1
  
Synonyms : LO017852.1
  
Possible biological names infered from orthology : Q3UQ84 / Q9BW92 / TARS2 / Threonine--tRNA ligase, mitochondrial / threonyl-tRNA synthetase 2, mitochondrial
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 1228073
Gene end: 1239617
  
Corresponding Affymetrix probe sets: Dr.6750.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103726
swissprot - F1Q6U0
Ensembl - ENSDARG00000075385
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TARS2ENSGALG00000043416Gallus gallus
 TARS2ENSG00000143374Homo sapiens
 Tars2ENSMUSG00000028107Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tars / threonyl-tRNA synthetase / P26639* / Q9D0R2* / Threonine--tRNA ligase, cytoplasmic *ENSDARG0000001325065
tarsl2 / threonyl-tRNA synthetase-like 2 / A2RTX5* / Q8BLY2* / Probable threonine--tRNA ligase 2, cytoplasmic *ENSDARG0000009277465
mrpl39 / mitochondrial ribosomal protein L39 / Q9JKF7* / Q9NYK5* / 39S ribosomal protein L39, mitochondrial *ENSDARG000000415702


Protein motifs (from Interpro)
Interpro ID Name
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002320  Threonine-tRNA ligase, class IIa
 IPR004154  Anticodon-binding
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR033728  Threonine-tRNA ligase catalytic core domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006435 threonyl-tRNA aminoacylation IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004829 threonine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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