ENSGALG00000003987


Gallus gallus

Features
Gene ID: ENSGALG00000003987
  
Biological name :TRAF4
  
Synonyms : TNF receptor associated factor 4 / TRAF4
  
Possible biological names infered from orthology : Q61382 / Q9BUZ4
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 5823470
Gene end: 5827376
  
Corresponding Affymetrix probe sets: GgaAffx.2480.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006340
Ensembl peptide - ENSGALP00000053878
Ensembl peptide - ENSGALP00000052535
Ensembl peptide - ENSGALP00000046441
NCBI entrez gene - 417577     See in Manteia.
RefSeq - XM_015296086
swissprot - E1BRJ5
swissprot - A0A1D5PM05
swissprot - A0A1D5PIA2
swissprot - A0A1D5P1A8
Ensembl - ENSGALG00000003987
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 traf4aENSDARG00000003963Danio rerio
 TRAF4ENSG00000076604Homo sapiens
 Traf4ENSMUSG00000017386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRAF2 / TNF receptor associated factor 2 / P39429* / Q12933*ENSGALG0000004283830
TRAF5 / TNF receptor associated factor 5 / O00463*ENSGALG0000000986428
TRAF3 / TNF receptor associated factor 3 / Q13114* / Q60803*ENSGALG0000001138925
TRAF1 / TNF receptor associated factor 1 / P39428* / Q13077*ENSGALG0000000158323
TRAF6 / TNF receptor associated factor 6 / P70196* / Q9Y4K3*ENSGALG0000000793223


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001841  Zinc finger, RING-type
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR012227  TNF receptor-associated factor TRAF
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR027138  TNF receptor-associated factor 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007250 activation of NF-kappaB-inducing kinase activity IEA
 biological_processGO:0007585 respiratory gaseous exchange IEA
 biological_processGO:0030323 respiratory tube development IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0045860 positive regulation of protein kinase activity IEA
 biological_processGO:0046330 positive regulation of JNK cascade IEA
 biological_processGO:0090073 positive regulation of protein homodimerization activity IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0031996 thioesterase binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050699 WW domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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