ENSGALG00000004420


Gallus gallus

Features
Gene ID: ENSGALG00000004420
  
Biological name :SDK1
  
Synonyms : SDK1 / sidekick cell adhesion molecule 1
  
Possible biological names infered from orthology : Protein sidekick-1 / Q3UH53 / Q7Z5N4
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 3530847
Gene end: 3889914
  
Corresponding Affymetrix probe sets: Gga.119.1.S1_at (Chicken Array)   Gga.14093.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046959
Ensembl peptide - ENSGALP00000060681
Ensembl peptide - ENSGALP00000007030
NCBI entrez gene - 373894     See in Manteia.
RefSeq - XM_015294105
RefSeq - NM_204105
RefSeq - XM_015294102
RefSeq - XM_015294103
RefSeq - XM_015294104
RefSeq Peptide - NP_989436
swissprot - A0A1L1RPH5
swissprot - F1NT50
swissprot - A0A1D5P2R1
Ensembl - ENSGALG00000004420
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdk1aENSDARG00000078866Danio rerio
 sdk1bENSDARG00000062854Danio rerio
 SDK1ENSG00000146555Homo sapiens
 Sdk1ENSMUSG00000039683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SDK2 / sidekick cell adhesion molecule 2 / Q58EX2* / Q6V4S5* / Protein sidekick-2 *ENSGALG0000003189557
DSCAML1 / DS cell adhesion molecule like 1 / Q8TD84*ENSGALG0000000731416
NEO1 / neogenin 1 / Q92859* / neogenin*ENSGALG0000000177415
DSCAM / DS cell adhesion molecule / O60469* / Q9ERC8* / Down syndrome cell adhesion molecule homolog *ENSGALG0000001613815
PRTG / protogenin precursor / Q2EY15* / Q2VWP7* / protogenin*ENSGALG0000003733611
IGDCC3 / immunoglobulin superfamily DCC subclass member 3 / Q8BQC3* / Q8IVU1*ENSGALG000000073717
IGDCC4 / immunoglobulin superfamily DCC subclass member 4 / Q8TDY8* / Q9EQS9*ENSGALG000000074105


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048148 behavioral response to cocaine IEA
 biological_processGO:0060998 regulation of dendritic spine development IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
SDK interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004420 SDK1 / sidekick cell adhesion molecule 1 / Q3UH53* / Q7Z5N4* / Protein sidekick-1 *  / complex / reaction






 

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