ENSGALG00000031895


Gallus gallus

Features
Gene ID: ENSGALG00000031895
  
Biological name :SDK2
  
Synonyms : SDK2 / sidekick cell adhesion molecule 2
  
Possible biological names infered from orthology : Protein sidekick-2 / Q58EX2 / Q6V4S5
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 9107305
Gene end: 9148769
  
Corresponding Affymetrix probe sets: Gga.118.1.S1_at (Chicken Array)   Gga.14791.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053420
Ensembl peptide - ENSGALP00000064562
Ensembl peptide - ENSGALP00000057471
Ensembl peptide - ENSGALP00000057449
NCBI entrez gene - 395215     See in Manteia.
RefSeq - NM_204538
RefSeq - XM_015279868
RefSeq Peptide - NP_989869
swissprot - A0A1L1S0A4
swissprot - A0A1D5PKQ9
swissprot - A0A1D5PWY1
swissprot - A0A1D5PWW0
Ensembl - ENSGALG00000031895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdk2bENSDARG00000060452Danio rerio
 si:ch211-148f13.1ENSDARG00000102161Danio rerio
 SDK2ENSG00000069188Homo sapiens
 Sdk2ENSMUSG00000041592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SDK1 / sidekick cell adhesion molecule 1 / Q3UH53* / Q7Z5N4* / Protein sidekick-1 *ENSGALG0000000442058
DSCAML1 / DS cell adhesion molecule like 1 / Q8TD84*ENSGALG0000000731416
DSCAM / DS cell adhesion molecule / O60469* / Q9ERC8* / Down syndrome cell adhesion molecule homolog *ENSGALG0000001613816
NEO1 / neogenin 1 / Q92859* / neogenin*ENSGALG0000000177415
PRTG / protogenin precursor / Q2EY15* / Q2VWP7* / protogenin*ENSGALG0000003733611
IGDCC3 / immunoglobulin superfamily DCC subclass member 3 / Q8BQC3* / Q8IVU1*ENSGALG000000073718
IGDCC4 / immunoglobulin superfamily DCC subclass member 4 / Q8TDY8* / Q9EQS9*ENSGALG000000074105


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0060219 camera-type eye photoreceptor cell differentiation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA


Pathways (from Reactome)
Pathway description
SDK interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000031895 SDK2 / sidekick cell adhesion molecule 2 / Q58EX2* / Q6V4S5* / Protein sidekick-2 *  / complex / reaction






 

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