ENSGALG00000005426


Gallus gallus

Features
Gene ID: ENSGALG00000005426
  
Biological name :FREM1
  
Synonyms : FRAS1 related extracellular matrix 1 / FREM1
  
Possible biological names infered from orthology : FRAS1-related extracellular matrix protein 1 / Q5H8C1 / Q684R7
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 31717648
Gene end: 31775857
  
Corresponding Affymetrix probe sets: Gga.12525.1.S1_at (Chicken Array)   GgaAffx.26502.1.S1_at (Chicken Array)   GgaAffx.3405.1.S1_at (Chicken Array)   GgaAffx.3406.1.S1_at (Chicken Array)   GgaAffx.3407.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046472
Ensembl peptide - ENSGALP00000008702
NCBI entrez gene - 427355     See in Manteia.
RefSeq - XM_015280193
RefSeq - XM_004949101
RefSeq - XM_004949102
swissprot - F1P5W0
swissprot - A0A1D5P1D8
Ensembl - ENSGALG00000005426
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 frem1aENSDARG00000069473Danio rerio
 FREM1ENSG00000164946Homo sapiens
 Frem1ENSMUSG00000059049Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FREM2 / FRAS1 related extracellular matrix protein 2 / Q5SZK8* / Q6NVD0*ENSGALG0000003367129
FRAS1 / Fraser extracellular matrix complex subunit 1 / Q80T14* / Q86XX4* / Extracellular matrix protein FRAS1 *ENSGALG0000001031622
BC067074* / cDNA sequence BC067074*ENSGALG0000002056117
CSPG4 / chondroitin sulfate proteoglycan 4 / Q6UVK1* / Q8VHY0*ENSGALG0000000267816


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR003644  Na-Ca exchanger/integrin-beta4
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR032825  FRAS1-related extracellular matrix protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0097094 craniofacial suture morphogenesis IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr