ENSGALG00000005620


Gallus gallus

Features
Gene ID: ENSGALG00000005620
  
Biological name :PDE12
  
Synonyms : PDE12 / phosphodiesterase 12
  
Possible biological names infered from orthology : 2,5-phosphodiesterase 12 / Q3TIU4 / Q6L8Q7
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 8716035
Gene end: 8719109
  
Corresponding Affymetrix probe sets: GgaAffx.3526.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009004
NCBI entrez gene - 107054443     See in Manteia.
RefSeq - XM_015293387
swissprot - F1NGS9
Ensembl - ENSGALG00000005620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pde12ENSDARG00000030964Danio rerio
 PDE12ENSG00000174840Homo sapiens
 Pde12ENSMUSG00000043702Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNOT6L / CCR4-NOT transcription complex subunit 6 like / Q8VEG6* / Q96LI5*ENSGALG0000001033329
ANGEL2 / protein angel homolog 2 / Q8K1C0* / Q5VTE6* / angel homolog 2* / Mus musculus angel homolog 2 (Angel2), transcript variant 3, mRNA.*ENSGALG0000000980228
ANGEL1 / angel homolog 1 / 1 * / Q8VCU0* / Q9UNK9*ENSGALG0000001037227
CNOT6 / CCR4-NOT transcription complex subunit 6 / Q8K3P5* / Q9ULM6*ENSGALG0000003431627
NOCT / nocturnin / O35710* / Q9UK39*ENSGALG0000003295726


Protein motifs (from Interpro)
Interpro ID Name
 IPR005135  Endonuclease/exonuclease/phosphatase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
 biological_processGO:0000958 mitochondrial mRNA catabolic process IEA
 biological_processGO:0035457 cellular response to interferon-alpha IEA
 biological_processGO:0044528 regulation of mitochondrial mRNA stability IEA
 biological_processGO:0045070 positive regulation of viral genome replication IEA
 biological_processGO:0060548 negative regulation of cell death IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0071359 cellular response to dsRNA IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090324 negative regulation of oxidative phosphorylation IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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