ENSGALG00000010333


Gallus gallus

Features
Gene ID: ENSGALG00000010333
  
Biological name :CNOT6L
  
Synonyms : CCR4-NOT transcription complex subunit 6 like / CNOT6L
  
Possible biological names infered from orthology : Q8VEG6 / Q96LI5
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 35229458
Gene end: 35239169
  
Corresponding Affymetrix probe sets: GgaAffx.6518.1.S1_at (Chicken Array)   GgaAffx.6518.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016801
NCBI entrez gene - 422508     See in Manteia.
RefSeq - XM_015276619
RefSeq - XM_420472
swissprot - E1C5L3
Ensembl - ENSGALG00000010333
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A2BHJ4ENSDARG00000054597Danio rerio
 CNOT6LENSG00000138767Homo sapiens
 Cnot6lENSMUSG00000034724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNOT6 / CCR4-NOT transcription complex subunit 6 / Q8K3P5* / Q9ULM6*ENSGALG0000003431679
ANGEL1 / angel homolog 1 / 1 * / Q8VCU0* / Q9UNK9*ENSGALG0000001037220
ANGEL2 / protein angel homolog 2 / Q8K1C0* / Q5VTE6* / angel homolog 2* / Mus musculus angel homolog 2 (Angel2), transcript variant 3, mRNA.*ENSGALG0000000980219
NOCT / nocturnin / O35710* / Q9UK39*ENSGALG0000003295718
PDE12 / phosphodiesterase 12 / Q3TIU4* / Q6L8Q7* / 2,5-phosphodiesterase 12 *ENSGALG0000000562011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010606 positive regulation of cytoplasmic mRNA processing body assembly IEA
 biological_processGO:0061157 mRNA destabilization IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030014 CCR4-NOT complex IEA
 molecular_functionGO:0004535 poly(A)-specific ribonuclease activity IEA


Pathways (from Reactome)
Pathway description
Deadenylation of mRNA
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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