ENSGALG00000006106


Gallus gallus

Features
Gene ID: ENSGALG00000006106
  
Biological name :TNFRSF6B
  
Synonyms : TNF receptor superfamily member 6b / TNFRSF6B
  
Possible biological names infered from orthology : O95407
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 9851270
Gene end: 9855152
  
Corresponding Affymetrix probe sets: Gga.5386.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009844
NCBI entrez gene - 395096     See in Manteia.
RefSeq - XM_004947134
RefSeq - XM_417434
swissprot - F1NCY6
Ensembl - ENSGALG00000006106
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfrsf11bENSDARG00000098377Danio rerio
 O95407ENSG00000243509Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNFRSF11B / tumor necrosis factor receptor superfamily member 11B precursor / O00300* / O08712* / TNF receptor superfamily member 11b* / tumor necrosis factor receptor superfamily, member ...ENSGALG0000004316734
TNFRSF21 / tumor necrosis factor receptor superfamily member 21 precursor / O75509* / Q9EPU5* / TNF receptor superfamily member 21* / Tumor necrosis factor receptor superfamily member 21 *ENSGALG0000001671926
TNFRSF1B / tumor necrosis factor receptor superfamily member 1B precursor / P20333* / P25119* / TNF receptor superfamily member 1B* / tumor necrosis factor receptor superfamily, member 1b*ENSGALG0000003421322
TNFRSF11A / TNF receptor superfamily member 11a / O35305* / Q9Y6Q6* / Tumor necrosis factor receptor superfamily member 11A *ENSGALG0000004564220
CD40 / tumor necrosis factor receptor superfamily member 5 precursor / P25942* / P27512* / CD40 molecule* / Tumor necrosis factor receptor superfamily member 5 *ENSGALG0000000701519


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway IEA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IBA
 biological_processGO:0097190 apoptotic signaling pathway IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 molecular_functionGO:0005031 tumor necrosis factor-activated receptor activity IBA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003076 FASLG / Fas ligand / Fasl* / P41047* / P48023* / Tumor necrosis factor ligand superfamily member 6 Tumor necrosis factor ligand superfamily member 6, membrane form Tumor necrosis factor lig...  / complex / reaction
 ENSGALG00000007174 TNFSF15 / TNF superfamily member 15 / O95150* / tumor necrosis factor (ligand) superfamily, member 15*  / complex / reaction






 

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