ENSGALG00000045642


Gallus gallus

Features
Gene ID: ENSGALG00000045642
  
Biological name :TNFRSF11A
  
Synonyms : TNF receptor superfamily member 11a / TNFRSF11A
  
Possible biological names infered from orthology : O35305 / Q9Y6Q6 / Tumor necrosis factor receptor superfamily member 11A
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 68475472
Gene end: 68498582
  
Corresponding Affymetrix probe sets: Gga.17640.1.S1_at (Chicken Array)   GgaAffx.8155.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061951
Ensembl peptide - ENSGALP00000062796
NCBI entrez gene - 769909     See in Manteia.
RefSeq - XM_001233218
RefSeq - XM_004939688
RefSeq - XM_004939689
swissprot - A0A1L1RVE1
swissprot - A0A1L1RT12
Ensembl - ENSGALG00000045642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cd40ENSDARG00000054968Danio rerio
 tnfrsf11aENSDARG00000087804Danio rerio
 Q9Y6Q6ENSG00000141655Homo sapiens
 O35305ENSMUSG00000026321Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CD40 / tumor necrosis factor receptor superfamily member 5 precursor / P25942* / P27512* / CD40 molecule* / Tumor necrosis factor receptor superfamily member 5 *ENSGALG0000000701511
TNFRSF21 / tumor necrosis factor receptor superfamily member 21 precursor / O75509* / Q9EPU5* / TNF receptor superfamily member 21* / Tumor necrosis factor receptor superfamily member 21 *ENSGALG0000001671911
TNFRSF1B / tumor necrosis factor receptor superfamily member 1B precursor / P20333* / P25119* / TNF receptor superfamily member 1B* / tumor necrosis factor receptor superfamily, member 1b*ENSGALG0000003421310
TNFRSF6B / TNF receptor superfamily member 6b / O95407*ENSGALG000000061069
TNFRSF11B / tumor necrosis factor receptor superfamily member 11B precursor / O00300* / O08712* / TNF receptor superfamily member 11b* / tumor necrosis factor receptor superfamily, member ...ENSGALG000000431679


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR022361  Tumour necrosis factor receptor 11A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IEA
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030316 osteoclast differentiation IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway IEA
 biological_processGO:0034097 response to cytokine IEA
 biological_processGO:0034612 response to tumor necrosis factor IEA
 biological_processGO:0043507 positive regulation of JUN kinase activity IEA
 biological_processGO:0048535 lymph node development IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0060086 circadian temperature homeostasis IEA
 biological_processGO:0060749 mammary gland alveolus development IEA
 biological_processGO:0070555 response to interleukin-1 IEA
 biological_processGO:0071812 positive regulation of fever generation by positive regulation of prostaglandin secretion IEA
 biological_processGO:0071847 TNFSF11-mediated signaling pathway IEA
 biological_processGO:0071848 positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005031 tumor necrosis factor-activated receptor activity IEA
 molecular_functionGO:0019955 cytokine binding IEA


Pathways (from Reactome)
Pathway description
TNFR2 non-canonical NF-kB pathway
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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